.. Virtual Brain Lab documentation master file, created by
   sphinx-quickstart on Wed Jun  8 16:18:12 2022.
   You can adapt this file completely to your liking, but it should at least
   contain the root `toctree` directive.

.. image:: https://github.com/VirtualBrainLab/.github/raw/main/images/brain_text-01.png
  :width: 650
  :alt: logo

=================

Virtual Brain Lab
==================

The VBL builds intuitive and interactive 3D visualizations for neuroscience.

We are located within the `Steinmetz Lab <http://steinmetzlab.net>`_ at the University of Washington and many of our projects are collaborations with the `International Brain Laboratory <https://www.internationalbrainlab.com>`_.

Please see the individual projects for installation instructions and documentation. You can find all our code on `Github <https://github.com/VirtualBrainLab>`_.

.. toctree::
   :hidden:
   :maxdepth: 2
   :caption: About the VBL

   01_about/overview
   01_about/team
   01_about/joinus

.. toctree::
   :hidden:
   :maxdepth: 2
   :caption: Pinpoint

   02_traj_planner/01_tp_intro
   02_traj_planner/02_tp_alignment
   02_traj_planner/03_tp_ephys_atlas
   02_traj_planner/04_tp_sensapex_link
   02_traj_planner/05_tp_development

.. toctree::
   :hidden:
   :maxdepth: 2
   :caption: Urchin

   03_unity_neuro/01_urn_intro
   03_unity_neuro/02_urn_development

.. toctree::
   :hidden:
   :maxdepth: 2
   :caption: Session Viewer

   04_session_viewer/01_sv_overview
   04_session_viewer/02_ibl_average_trial

.. toctree::
   :hidden:
   :maxdepth: 2
   :caption: Misc

   05_misc/01_vbl_core
   05_misc/02_addressables_storage
   05_misc/03_sensapex_link
   05_misc/04_general_dev
   05_misc/05_unity_tutorials

.. toctree::
   :hidden:
   :caption: API Reference
   :maxdepth: 1

   api_reference.rst