Index

A

AngularOutputData (class in ephys_link.common)

B

bcolors (class in oursin.client)

bypass_calibration() (PlatformHandler method) (Server method)

C

calibrate() (NewScaleManipulator method) (PlatformHandler method) (Server method) call_calibrate() (SensapexManipulator method) can_write (CanWriteInputDataFormat attribute) CanWriteInputDataFormat (class in ephys_link.common) catch_all() (Server static method) change_id() (in module oursin.client) clear() (in module oursin.renderer) clear_areas() (in module oursin.renderer) clear_neurons() (in module oursin.renderer) clear_probes() (in module oursin.renderer)

clear_texts() (in module oursin.renderer) clear_volumes() (in module oursin.renderer) close() (in module oursin.client) close_server() (Server method) connect() (in module oursin.client) (Server method) connected() (in module oursin.client) create() (in module oursin.lines) (in module oursin.neurons) (in module oursin.primitives) (in module oursin.probes) (in module oursin.text) (in module oursin.volumes)

D

delete() (in module oursin.lines) (in module oursin.neurons) (in module oursin.primitives) (in module oursin.probes) (in module oursin.text) (in module oursin.volumes) depth (DriveToDepthInputDataFormat attribute) disconnect() (in module oursin.client) (Server method)

dprint() (in module ephys_link.common) drive_to_depth() (NewScaleManipulator method) (PlatformHandler method) (SensapexManipulator method) (Server method) (UMP3Manipulator method) DriveToDepthInputDataFormat (class in ephys_link.common) DriveToDepthOutputData (class in ephys_link.common)

E

ephys_link module ephys_link.common module ephys_link.platform_handler module ephys_link.platform_manipulator module ephys_link.platforms.new_scale_handler module ephys_link.platforms.new_scale_manipulator module

ephys_link.platforms.new_scale_pathfinder_handler module ephys_link.platforms.sensapex_handler module ephys_link.platforms.sensapex_manipulator module ephys_link.platforms.ump3_handler module ephys_link.platforms.ump3_manipulator module ephys_link.server module

F

FAIL (bcolors attribute)

G

get_angles() (PlatformHandler method) (Server method) get_calibrated() (NewScaleManipulator method) (SensapexManipulator method) get_can_write() (NewScaleManipulator method) (SensapexManipulator method) get_manipulators() (PlatformHandler method) (Server method) get_pos() (NewScaleManipulator method) (PlatformHandler method) (SensapexManipulator method) (Server method) (UMP3Manipulator method)

get_shank_count() (PlatformHandler method) (Server method) get_version() (Server static method) GetManipulatorsOutputData (class in ephys_link.common) goto_pos() (NewScaleManipulator method) (PlatformHandler method) (SensapexManipulator method) (Server method) (UMP3Manipulator method) GotoPositionInputDataFormat (class in ephys_link.common)

H

hours (CanWriteInputDataFormat attribute)

I

inside (InsideBrainInputDataFormat attribute)

InsideBrainInputDataFormat (class in ephys_link.common)

J

json() (AngularOutputData method) (DriveToDepthOutputData method) (GetManipulatorsOutputData method) (PositionalOutputData method) (ShankCountOutputData method) (StateOutputData method)

L

launch() (Server method)

load_beryl() (in module oursin.atlas.ccf) load_cosmos() (in module oursin.atlas.ccf)

M

manipulator_id (CanWriteInputDataFormat attribute) (DriveToDepthInputDataFormat attribute) (GotoPositionInputDataFormat attribute) (InsideBrainInputDataFormat attribute) message() (in module oursin.client) module ephys_link ephys_link.common ephys_link.platform_handler ephys_link.platform_manipulator ephys_link.platforms.new_scale_handler ephys_link.platforms.new_scale_manipulator ephys_link.platforms.new_scale_pathfinder_handler ephys_link.platforms.sensapex_handler ephys_link.platforms.sensapex_manipulator ephys_link.platforms.ump3_handler ephys_link.platforms.ump3_manipulator ephys_link.server oursin, [1] oursin.atlas oursin.atlas.ccf oursin.camera oursin.client oursin.colors oursin.colors.colors oursin.colors.xkcd_rgb oursin.lines oursin.neurons oursin.primitives oursin.probes oursin.renderer oursin.text oursin.volumes

N

NewScaleHandler (class in ephys_link.platforms.new_scale_handler)

NewScaleManipulator (class in ephys_link.platforms.new_scale_manipulator) NewScalePathfinderHandler (class in ephys_link.platforms.new_scale_pathfinder_handler)

O

oursin module, [1] oursin.atlas module oursin.atlas.ccf module oursin.camera module oursin.client module oursin.colors module oursin.colors.colors module oursin.colors.xkcd_rgb module

oursin.lines module oursin.neurons module oursin.primitives module oursin.probes module oursin.renderer module oursin.text module oursin.volumes module

P

PlatformHandler (class in ephys_link.platform_handler) PlatformManipulator (class in ephys_link.platform_manipulator)

pos (GotoPositionInputDataFormat attribute) PositionalOutputData (class in ephys_link.common)

Q

query_all_axes() (NewScaleManipulator method)

query_data() (NewScalePathfinderHandler method) query_manipulator_data() (NewScalePathfinderHandler method)

R

register_manipulator() (PlatformHandler method) (Server method)

reset() (PlatformHandler method) reset_can_write() (NewScaleManipulator method) (SensapexManipulator method)

S

SensapexHandler (class in ephys_link.platforms.sensapex_handler) SensapexManipulator (class in ephys_link.platforms.sensapex_manipulator) Server (class in ephys_link.server) set_alpha() (in module oursin.atlas.ccf) set_angle() (in module oursin.probes) set_calibrated() (NewScaleManipulator method) (SensapexManipulator method) set_can_write() (NewScaleManipulator method) (PlatformHandler method) (SensapexManipulator method) (Server method) set_color() (in module oursin.atlas.ccf) (in module oursin.lines) (in module oursin.neurons) (in module oursin.primitives) (in module oursin.probes) (in module oursin.text) set_colormap() (in module oursin.atlas.ccf) (in module oursin.volumes) set_data() (in module oursin.atlas.ccf) (in module oursin.volumes) set_data_index() (in module oursin.atlas.ccf) set_inside_brain() (NewScaleManipulator method) (PlatformHandler method) (SensapexManipulator method) (Server method) set_intensity() (in module oursin.atlas.ccf) set_material() (in module oursin.atlas.ccf) (in module oursin.neurons) set_pan() (in module oursin.camera)

set_position() (in module oursin.camera) (in module oursin.lines) (in module oursin.neurons) (in module oursin.primitives) (in module oursin.probes) (in module oursin.text) set_rotation() (in module oursin.camera) set_scale() (in module oursin.primitives) set_shape() (in module oursin.neurons) set_size() (in module oursin.neurons) (in module oursin.probes) (in module oursin.text) set_slice_data() (in module oursin.volumes) set_target() (in module oursin.camera) set_target_area() (in module oursin.camera) set_text() (in module oursin.text) set_visibility() (in module oursin.atlas.ccf) (in module oursin.volumes) set_visibility_allen() (in module oursin.volumes) set_zoom() (in module oursin.camera) setup() (in module oursin.renderer) ShankCountOutputData (class in ephys_link.common) speed (DriveToDepthInputDataFormat attribute) (GotoPositionInputDataFormat attribute) StateOutputData (class in ephys_link.common) stop() (NewScaleManipulator method) (PlatformHandler method) (PlatformManipulator method) (SensapexManipulator method) (Server method)

U

UMP3Handler (class in ephys_link.platforms.ump3_handler) UMP3Manipulator (class in ephys_link.platforms.ump3_manipulator)

unregister_manipulator() (PlatformHandler method) (Server method)

V

VALID_MANIPULATOR_IDS (NewScalePathfinderHandler attribute)

W

WARNING (bcolors attribute)